Cytidine, 2'-deoxy-2'-fluoro-


Chemical Name: Cytidine, 2'-deoxy-2'-fluoro-
CAS Number: 10212-20-1
Product Number: AG0006OP(AGN-PC-0NVCMZ)
Synonyms:
MDL No:
Molecular Formula: C9H12FN3O4
Molecular Weight: 245.2077

Identification/Properties


Computed Properties
Molecular Weight:
245.21g/mol
XLogP3:
-1.1
Hydrogen Bond Donor Count:
3
Hydrogen Bond Acceptor Count:
5
Rotatable Bond Count:
2
Exact Mass:
245.081g/mol
Monoisotopic Mass:
245.081g/mol
Topological Polar Surface Area:
108A^2
Heavy Atom Count:
17
Formal Charge:
0
Complexity:
386
Isotope Atom Count:
0
Defined Atom Stereocenter Count:
4
Undefined Atom Stereocenter Count:
0
Defined Bond Stereocenter Count:
0
Undefined Bond Stereocenter Count:
0
Covalently-Bonded Unit Count:
1
Compound Is Canonicalized:
Yes

Safety Information


GHS Pictogram:
Signal Word:
Warning
UN#:
-
Hazard Statements:
H315-H319-H335
Precautionary Statements:
P261-P305+P351+P338
Class:
-
Packing Group:
-

NMR Spectrum


Other Analytical Data


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Chemical Structure



2'-Fluoro-2'-deoxycytidine, a vital nucleoside analog, finds widespread applicability in chemical synthesis due to its unique properties. Its incorporation into nucleic acid molecules can alter the biophysical and chemical properties of DNA or RNA, making it a valuable tool in nucleic acid research and drug development. In chemical synthesis, 2'-Fluoro-2'-deoxycytidine is utilized as a building block for the creation of modified nucleic acid sequences with enhanced stability and altered hybridization properties. Its presence can also confer resistance to degradation by nucleases, making it a valuable component in the design of therapeutic nucleic acid analogs. Furthermore, the introduction of 2'-fluoro substituents can impact base pairing interactions, leading to altered specificity in nucleic acid recognition. As such, the precise incorporation of 2'-Fluoro-2'-deoxycytidine in synthetic nucleic acid sequences offers a powerful strategy for modulating nucleic acid structure-function relationships and exploring novel applications in molecular biology and medicinal chemistry.